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ISB Nomenclature

ISB Glossary

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Term Main definition

A binary format containing read information mapped to a genome sequence. Format output from SAMTool. Read in GenomeTraveler can display alignment.

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Synonyms - Binary Alignment Map

To do it collectively. Batch operation.

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Synonyms - batch
Batch Homology Search

Function of collecting homology search by using many features as a query. Implemented on IMCGE or higher edition of IMC.

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Synonyms - Auto Homology Search Homology Search by Selected Feature
Batch Primer Design

Design the Primer Set for collecting a large number of regions collectively. Implemented in IMC.

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Synonyms - Batch PCR Primer Design
Binary Best Hit

Even if you replace Query and Subject by homology search etc. the relationship that becomes the best score in the list of hit Subjects.

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Synonyms - BBH

Affymetrix's array file format. Includes probe position information on the genome. It is used with IMCAE or higher.

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